BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027A04LP1|AL428644
(894 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1221 1772 0.0
>3x_Contig1221
Length = 4893
Score = 1772 bits (894), Expect = 0.0
Identities = 894/894 (100%)
Strand = Plus / Minus
Query: 1 atctaacaacgagaagaccctatcaatcatagacaaatcgttcgcaaatacccctaccgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2304 atctaacaacgagaagaccctatcaatcatagacaaatcgttcgcaaatacccctaccgt 2245
Query: 61 atccaagctctgagcatacgatataactccatgccttgagagcctaccatacgacggctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2244 atccaagctctgagcatacgatataactccatgccttgagagcctaccatacgacggctt 2185
Query: 121 gaatccaaaagttgaagtgtatgaggctggtaaccttacggacccacctgtgtcagttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2184 gaatccaaaagttgaagtgtatgaggctggtaaccttacggacccacctgtgtcagttcc 2125
Query: 181 taatgcaaaatcaacaactccggatgctactgcagcagcagatccagatgacgaaccacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2124 taatgcaaaatcaacaactccggatgctactgcagcagcagatccagatgacgaaccacc 2065
Query: 241 tgcgataactcgatccttgtgatcaaagagcgggttgaatgttggcccaaaatgagaatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2064 tgcgataactcgatccttgtgatcaaagagcgggttgaatgttggcccaaaatgagaatg 2005
Query: 301 tatcccagcagaacccataccgaattcatccatgttggctttaccagctatcaccgttcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2004 tatcccagcagaacccataccgaattcatccatgttggctttaccagctatcaccgttcc 1945
Query: 361 tgcttctagcaataacgaaacaacggtggcatcaaaaggcgacatatagccatctaaaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1944 tgcttctagcaataacgaaacaacggtggcatcaaaaggcgacatatagccatctaaaat 1885
Query: 421 cttagaggcacatgtagaaggcatattcttggtggctatattgtccttaatggcggccag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1884 cttagaggcacatgtagaaggcatattcttggtggctatattgtccttaatggcggccag 1825
Query: 481 ggtataattcaacggtttatctgcggtagtgttcttatctattgattccaattgcgacga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1824 ggtataattcaacggtttatctgcggtagtgttcttatctattgattccaattgcgacga 1765
Query: 541 tgctctctcattaacatatgtgaaaacattgtagcgactttgaatctccggtatctgctg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1764 tgctctctcattaacatatgtgaaaacattgtagcgactttgaatctccggtatctgctg 1705
Query: 601 gagcctcgaaagtgccgtcttgatagacatgatcagtagcgagtgtgtatggtcaattaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1704 gagcctcgaaagtgccgtcttgatagacatgatcagtagcgagtgtgtatggtcaattaa 1645
Query: 661 aagagaattagagtaagtcactccattttcacttcccaatgtaatatattgtagtgtatt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1644 aagagaattagagtaagtcactccattttcacttcccaatgtaatatattgtagtgtatt 1585
Query: 721 gattgaaaagaactaaattcgattctaaggtttcatatctatgaaacttattaactattg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1584 gattgaaaagaactaaattcgattctaaggtttcatatctatgaaacttattaactattg 1525
Query: 781 aacagttaaagatcacaacccgattagggaccgatatatgggacatactagcgcacattc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1524 aacagttaaagatcacaacccgattagggaccgatatatgggacatactagcgcacattc 1465
Query: 841 ataactagagaccgggaataactcatggctgttgaaataatcgatctatctact 894
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1464 ataactagagaccgggaataactcatggctgttgaaataatcgatctatctact 1411
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5212
Number of Sequences: 1807
Number of extensions: 5212
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 894
length of database: 10,358,551
effective HSP length: 16
effective length of query: 878
effective length of database: 10,329,639
effective search space: 9069423042
effective search space used: 9069423042
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)